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Technological Innovations in Neuroscience Awards

2008-2009
Henry Lester, Ph.D., California Institute of Technology
Ion Channels for Neuronal Engineering
Lester will use ion channels and receptors to gain insight into how neurons are connected within circuits and how such circuits control behavior. He will engineer new receptor channels that respond only to a drug, ivermectin, that can be delivered in an animal’s diet. Once these receptors are developed, it will be possible to study how activating or inhibiting selected neurons influences behavior.
Charles M. Lieber, Ph.D., Harvard University
Nanoelectronic Device Arrays for Electrical and Chemical Mapping of Neural Networks
Lieber plans to develop and demonstrate new nanotechnology-enabled electrophysiology tools to measure electrical and biochemical signaling at the scale of natural synapses, using samples ranging from cultured neural networks to brain tissue. In the long term, these tools may be used as powerful new interfaces between the brain and neural prosthetic devices in biomedical research and, ultimately, treatment.
Fernando Nottebohm, Rockefeller University
Development of a Technique for Making Transgenic Songbirds
The study of vocal learning in songbirds provides an excellent way to explore how memories are stored in a complex brain and how damage to the central nervous system can be repaired by neuronal replacement. Nottebohm seeks to develop a protocol for efficient production of transgenic songbirds in order to test the involvement that individual genes might have in learning and brain repair.
Dalibor Sames, Ph.D., and David Sulzer, Ph.D., Columbia University
Development of Fluorescent False Neurotransmitters: Novel Probes for Direct Visualization of Neurotransmitter Release from Individual Presynaptic Terminals
Sames and Sulzer have developed Fluorescent False Neurotransmitters (FFN) that act as optical tracers of dopamine and enable the first means to optically image neurotransmission at individual synapses. Applying FFNs, Sames and Sulzer will develop new optical methods to examine the synaptic changes associated with learning as well as pathological processes relevant to neurological and psychiatric disorders such as Parkinson’s disease and schizophrenia.
2007-2008
Paul Brehm, Ph.D., Oregon Health & Science University
A novel green fluorescent protein from echinoderms provides a long-term record of neuronal network activity
Brehm is exploring a new way to image cellular activity in healthy and diseased tissue. He proposes an alternative to the jellyfish green fluorescent proteinthe bioluminescent brittlestar Ophiopsila, whose long-lasting fluorescence in nerve cells can provide a long-term history of their cellular activity.
Timothy Holy, Ph.D., Washington University School of Medicine
High-speed three-dimensional optical imaging of neural activity in intact tissue
Holy is developing optical methods for recording simultaneously from very large populations of neurons by using thin sheets of light that quickly scan brain tissue in three dimensions. If successful, the study may help scientists observe pattern recognition and learning at the cellular level.
Krisha Shenoy, Ph.D., Stanford University
HermesC: A continuous neural recording system for freely behaving primates
Shenoy's lab is trying to learn more about how neurons act by developing a miniature, head-mounted, high-quality recording system for use on monkeys going about their everyday activities. If successful, this work will create a recording device that can track individual neurons in behaving monkeys for days and weeks.
Gina Turrigiano, Ph.D., Brandeis University
Mapping the position of synaptic proteins using super-resolution fluorescence cryo-microscopy
Turrigiano and her collaborator, David DeRosier, Ph.D., will develop tools to map the way synaptic proteins are arranged into molecular machines that can generate memories and cognitive functions. If this proves successful, they will eventually be able to determine how synapses become disorganized in disease states.
2006-2007
Pamela M. England, Ph.D., University of California at San Francisco
Monitoring AMPA Receptor Trafficking in Real Time
The England lab will develop a novel set of molecular tools, based on synthetic derivatives of philanthotoxin, that could be used to study the cell surface trafficking of the AMPA subtype of glutamate receptor. The goal is to produce a set of toxin derivatives that will inactivate AMPA receptors with specific subunit compositions, thus enabling pharmacological investigation of the role of these different classes of AMPA receptors in living neurons.
Alan Jasanoff, Ph.D., Massachusetts Institute of Technology
Cellular-Level Functional MRI with Calcium Imaging Agents
Jasanoff will explore a novel method of functional Magnetic Resonance Imaging (fMRI), developed in his lab, based on iron oxide nanoparticles that produce image contrast when they aggregate. If successful, the new method will be a more direct measure of neural activity, with the potential for improved spatial and temporal resolution in fMRI.
Richard J. Krauzlis, Ph.D., and Edward M. Callaway, Ph.D., The Salk Institute for Biological Studies
Using Viral Vectors to Probe Sensory-Motor Circuits in Behaving Non-human Primates
Krauzlis and Callaway will develop a method to inactivate specific subpopulations of neurons in localized regions of the monkey cerebral cortex. If successful, their method will provide a means to assess how specific subpopulations of neurons in different brain regions function in circuits to enable higher brain functions, such as perception, memory and sensory-motor control.
Markus Meister, Ph.D., Harvard University
Wireless recording of multi-neuronal spike trains in freely moving animals
Meister and his collaborators, Alan Litke of the University of California, Santa Cruz, and Athanassios Siapas of Caltech, will engineer a wireless microelectrode system that will allow the recording of neural electrical signals from freely moving animals without wires attached. Combining technologies for miniaturization and lightweight materials, this system should facilitate the measurement of neural dynamics during truly natural behaviors, such as burrowing, climbing or flying.
2005-2006
Karl Deisseroth, M.D., Ph.D., Stanford University
Noninvasive, High Temporal Resolution Control of Neuronal Activity Using a Light-Sensitive Ion Channel from the Alga C. Reinhardtii
Deisseroth's lab, including postdoctoral fellow collaborator Edward Boyden, will develop a new tool, based on a genetically encoded light sensitive ion channel from algae, to stimulate electrical activity in specific sets of neurons with light. Their goal is to stimulate individual action potentials with millisecond time precision and to control what neurons are stimulated using genetic methods to target channel protein expression.
Samie R. Jaffrey, M.D., Ph.D., Weill Medical College, Cornell University
Real-time Imaging of RNA in Living Neurons Using Conditionally Fluorescent Small Molecules
Jaffrey's lab will further develop a system to enable visualization of RNA using live-cell fluorescence microscopy. His technique is based on the construction of short RNA sequences that bind to a fluorophore and greatly increase its light emission. The fluorophore is derived from that used in Green Fluorescent Protein (GFP). The goal is to revolutionize the study of RNA in the same way that GFP technology has revolutionized protein visualization.
Jeff W. Lichtman, M.D., Ph.D., Harvard University
Kenneth Hayworth, University of Southern California
Development of an Automatic Tape-collecting Lathe-Ultramicrotome for Large-scale Brain Reconstruction
Hayworth and Lichtman are developing a tool to slice and automatically collect thousands of tissue sections for imaging via transmission electron microscopy (TEM). TEM serial section reconstruction is the only technology proven capable of mapping out, at the finest level of resolution, the exact synaptic connectivity of all the neurons within a volume of brain tissue. But application is limited because the ultrathin sections have to be collected manually. This tool would automate the process, making serial sectioning accessible to many labs and useful on larger tissue volumes.
Alice Y. Ting, Ph.D., Massachusetts Institute of Technology
Imaging Neuronal Protein Trafficking by Optical and Electron Microscopy Using Biotin Ligase Labeling
Ting proposes an improved technology to visualize and quantify membrane protein trafficking. She has developed a highly selective enzyme-based labeling technique by which to distinguish molecules existing on neuron surfaces before a stimulus from those appearing after the stimulus. The spatial distribution of labeled molecules can then be observed with optical imaging and, with some modifications, can also be seen in higher resolution with electron microscopy.
2004-2005
E.J. Chichilnisky, Ph.D., The Salk Institute
A.M. Litke, Ph.D., Santa Cruz Institute for Particle Physics
Probing the Retina
Chichilnisky, a neurobiologist, and Litke, an experimental physicist, are collaborating on technology to record and stimulate electrical activity in hundreds of neurons at a time on a fine spatial and temporal scale. This will enable them to study how large populations of neurons process and encode information to control perception and behavior. They first plan to study the retina, and, in turn, other neural systems.
Daniel T. Chiu, Ph.D., University of Washington
Spatially and Temporally Resolved Delivery of Stimuli to Single Neuronal Cells
Nanocapsules are extraordinarily small "shells" that can contain something as minute as a molecule and deliver it to a selected target. Chiu is developing and perfecting new types of nanocapsules and refining existing ones to study how a single neuronal cell processes the arrival of a signal at its membrane surface. Nanocapsules will be useful in mapping cell surface proteins and probing how receptors send signals and trigger synaptic transmission.
Susan L. Lindquist, Ph.D., Whitehead Institute for Biomedical Research
Development and Use of Yeast Model Systems for Neurodegenerative Diseases and High Throughput Screening
Lindquist proposes to examine neurodegenerative diseases by studying the genes in baker's yeast. Because of the great success her lab has had using yeast as a model system to study Parkinson's disease, she plans to extend the model to two more classes of disease-the tauopathies (including Alzheimer's) and spinocerebeller ataxia-3.
Daniel L. Minor, Jr., Ph.D., University of California, San Francisco
Directed Evolution of Ion Channel Modulators from Natural and Designed Libraries
Minor is working on a new approach to identify molecules that block or open ion channels, the proteins that are the key to electrical signaling in the brain. He will study natural peptides from venomous creatures and will make venom-like molecules for testing. Creating molecules that mimic those in nature and making them widely available will accelerate the search for drugs that may act upon specific ion channels.
Stephen J. Smith, Ph.D., Stanford University School of Medicine
Methods for the Delineation of Brain Circuitry by Serial-Sectioning Scanning Electron Microscopy
Smith is designing tools to enable neuroscience to benefit from what he calls the microscope of the 21st century, invented by his collaborator, Winfried Denk, Ph.D., a biophysicist at the Max Planck Institute. They are developing automated Serial-Sectioning Scanning Electron Microscopy (S3EM) methods that, for the first time, will provide the capacity to analyze complete brain circuits in minute detail. Smith is developing ways to stain brain tissues for analysis with this microscope, and computational tools to analyze the immense volume of information the new techniques will yield.
2003-2004Stuart Firestein, Ph.D., Columbia University
A Genetically Encoded Optical Sensor of Membrane Voltage Firestein and his collaborator, Josef Lazar, Ph.D., propose to test a new type of voltage-sensing protein that may be able to detect very small electrical events and to visualize voltage changes in a large number of cells simultaneously. This would promote a level of investigation into information processing in the brain that is currently beyond reach.
David Heeger, Ph.D., New York University
High-Resolution fMRI Heeger and his collaborator, Souheil Inati, Ph.D., along with Stanford University scientists John Pauly and David Ress, plan to take a new approach to improving spatial resolution of functional magnetic resonance imaging (fMRI) to enable it too routinely acquire fMRI data at extremely high resolution. The team aims to help solve some of the fundamental problems with conventional MRI.
Paul Slesinger, Ph.D., The Salk Institute for Biological Studies
G Protein Receptor Energy Transfer (GRET) System for Monitoring Signal Transduction in Neurons Modulation of nerve cell communication occurs when chemical neurotransmitters bind to specific types of G protein-coupled neurotransmitter receptors (GPCR) that, in turn, activate G proteins. To study dynamic changes in G protein activity during nerve cell communication, Slesinger proposes to develop a protein-based, fluorescent detector for G proteins that is based on the property of fluorescence resonance energy transfer (FRET).
2002-2003Liqun Luo, Ph.D., Stanford University
Single Neuron Labeling and Genetic Manipulation in Mice Luo is working on a genetic method to manipulate and trace single neurons in mice to learn how neural networks are assembled during development and later modified by experience.
A. David Redish, Ph.D.; Babak Ziaie, Ph.D.; and Arthur G. Erdman, Ph.D., University of Minnesota
Wireless Recording of Neural Ensembles in Awake, Behaving Rats The collaborators-a neuroscientist, an electrical engineer, and a mechanical engineer-are developing a wireless method of recording neuronal spike trains from awake, behaving rats to enhance understanding of learning and behavior.
Bernardo Sabatini, M.D., Ph.D., Harvard Medical School
Optical Tools for the Analysis of Protein Translation in Extrasomatic Neuronal Compartments To explore how neurons establish communication channels and how the brain stores and recalls information, Sabatini is developing molecules that emit light when neurons make proteins, and a microscope to view the process deep within the living brain.
Karel Svoboda, Ph.D., Cold Spring Harbor Laboratory
Regulation of Synaptic Transmission in vivo with High Spatial and Temporal Specificity Svoboda is developing molecular tools to further the understanding of how synapses organize brain circuitry.
2001-2002
Helen M. Blau, Ph.D., Stanford University Minimally Invasive, Regulated Gene Delivery to the Central Nervous System Blau's lab is investigating a novel means of delivering therapeutic genes to the central nervous system, using bone marrow cells engineered with genes capable of targeting disease.
Graham C.R. Ellis-Davies, Ph.D., MCP Hahnemann University Functional Imaging of Neuroreceptors in Living Brain Slices by Two-photon Uncaging of Neurotransmitters Ellis-Davies is developing innovative methods to make images of aspects of brain function that have not been seen before, devising a form of neurotransmitters that remain biologically inert until activated by an intense flash of focused light.
Dwayne Godwin, Ph.D., Wake Forest University School of Medicine Unveiling Chains of Functional Connectivity with Viral DNA By injecting cells with viral DNA, chemically marking the virus, and tracing its spread to connected cells, Godwin is exploring new ways to reveal how nerve cells in the brain send and receive messages.
Seong-Gi Kim, Ph.D., University of Minnesota Medical School
Development of In Vivo Perfusion-based Columnar-resolution fMRI
Kim is working to increase the power of functional magnetic resonance imaging to study brain activity in greater detail.
2000-2001
Stephen Lippard, Ph.D., Massachusetts Institute of Technology Synthetic Chemistry to Develop Zinc Sensors to Probe Neurochemical Signaling
Lippard is synthesizing novel fluorescent sensors that will detect zinc ions and nitric oxide in living cells and reveal their spatial pattern.
Partha Mitra, Ph.D., and Richard Andersen, Ph.D., California Institute of Technology Developing Techniques to Record and Read-out Population Codes in Real Time from the Parietal Reach Region Mitra and Andersen use mathematical techniques to analyze the activity of ensembles of neurons, hoping ultimately to decode the relationship between neural activity and behavior.
William Newsome, Ph.D., and Mark Schnitzer, Ph.D., Stanford University School of Medicine In Vivo Brain Dynamics Studied with Fiber Optics and Optical Coherence Tomography Schnitzer and Newsome (who received a special, $50,000 award) are studying brain dynamics by localizing recording sites, mapping the distribution of molecular markers, and monitoring patterns of brain activity by the precise use of light.
Timothy Ryan, Ph.D., Weill Medical College of Cornell University, and Gero Miesenböck, Ph.D., Memorial Sloan Kettering Cancer Center Design and Application of pH-based Optical Sensing of Synaptic Activity
The scientists are developing novel fluorescent indicators of synaptic activity based on sensitivity to changes in acidity.
Daniel Turnbull, Ph.D., New York University School of Medicine In Vivo µMR Imaging of Neuronal Migration in the Mouse Brain
Turnbull is working on a new imaging method to visualize the migration of neurons in the developing mouse brain, labeling new neurons and following them in intact animals over several days with magnetic resonance microimaging.
1999-2000
Michael E. Greenberg, Ph.D., and Ricardo E. Dolmetsch, Ph.D., Boston Children's Hospital New Technologies for Studying the Temporal and Spatial Control of Transcription and Translation in Intact Neurons
The scientists are developing a method to visualize gene activity in living nerve cells, using molecular amplifiers and fluorescence detection, to see how genes affect one another.
Paul W. Glimcher, Ph.D., New York University Experimental Neurosonography
Glimcher's research explores diagnostic ultrasound to make possible the precise placement of recording electrodes in the brains of awake, active primates.
Leslie C. Griffith, M.D., Ph.D., and Jeffrey C. Hall, Ph.D., Brandeis University Real-time Signal Transduction Sensors
Griffith and Hall are developing genetic sensors that can be introduced into individual nerve cells of living fruit flies, in an effort to determine when a cell is recruited to perform its behavioral role.
Warren S. Warren, Ph.D., Princeton University Zero Quantum Functional Magnetic Resonance Imaging
Warren's bold initiative seeks to make fMRI more powerful, increasing its resolution more than 100 times, allowing it to reveal active areas of the brain in far greater detail and with better contrast.
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